Insertion junction: CLIP2.038135_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038135
Chromosome:chromosome 3
Location:3844679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170200 (1 of 2) PTHR10857:SF0 - PROTEIN GEM-4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGCTGCGCCTAATAGTGGTGGATGTGGACAAGGGTCAGGACCCCAG
Internal bar code:GGCGTTGGAGACCAGTGGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3259
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGTGGCCAAGTGTCTTT
Suggested primer 2:GCACGGAGATGATCGCAAAC