Insertion junction: CLIP2.038146_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038146
Chromosome:chromosome 1
Location:223299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001350 ABC1 (1 of 3) 3.6.3.47 - Fatty-acyl-CoA-transporting ATPase; ABC transporter gene_edge/mRNA_edge/5'UTR
Cre01.g001400 ZMP1 (1 of 1) 3.4.24.36 - Leishmanolysin / Promastigote surface endopeptidase; Zinc-metallopeptidase-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATACATAGAGGTATGTGCCCCTGATACAAATGGAGCACAACCTGCTG
Internal bar code:GTCAGGACGACAGGGCCTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTTGCAGCAACGAAGCC
Suggested primer 2:TCATGCTCATCCTCGTGCTC