Insertion junction: CLIP2.038154_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038154
Chromosome:chromosome 10
Location:2004493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432250 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCGCCAGCCCGGGCGGCGCACCGGACCTCCGGCACAGCAGCAGCT
Internal bar code:CCTTGTCAGTGTTTAGGGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCGTCGTTACAGCTCCA
Suggested primer 2:CGTAGGTGTGACCACGAACA