Insertion junction: CLIP2.038166_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038166
Chromosome:chromosome 12
Location:7948352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552850 CGL77 (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAATTCAAGGCCCAAGTCAACCGGGACCGAATGGGGTTATGGGCTCTG
Internal bar code:TATAATGATCTGGAGTGCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1417
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCGAGAGGATTAGGGAC
Suggested primer 2:TGGGAGGTAGGAAGTGGGAG