Insertion junction: CLIP2.038169_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038169
Chromosome:chromosome 9
Location:3451577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00132499

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCCTTTGCTGAGCCTTTACACAGCTATGCAGCCAGTGCCCGGGCTAC
Internal bar code:TGTGAAGGCATCACCTCAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2634
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCGTACAGGATTGTGCT
Suggested primer 2:ATCCCCGGTCATAGGTTGGA