Insertion junction: CLIP2.038180_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038180
Chromosome:chromosome 2
Location:4329273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105050 (1 of 1) PTHR34810:SF1 - DNA-BINDING PROTEIN BIN4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCCTTTTGGGGTGGGGGTGGGGGTGGCACGGCTGCGGGGCGCTGCA
Internal bar code:GACTGCTGGGGTAATGGTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTGGTAGTTGTCCTGG
Suggested primer 2:TAGGCCTTTCCCTCTCCTCC