Insertion junction: CLIP2.038187_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038187
Chromosome:chromosome 3
Location:672729
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145747 SHK7,SHKH1 (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase; Chorismate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCTCACCCATCCTCAAGGCCCGGCCAAGGTGACGTGATGCCTCCCAC
Internal bar code:CTCCACTCTGACATCTCTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1607
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTGGAATGGGTCAGGG
Suggested primer 2:GCTCACCCCCATTTAGTGCT