Insertion junction: CLIP2.038199_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038199
Chromosome:chromosome 16
Location:4055566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690350 SNR6 SNARE-associated Golgi protein; (1 of 1) PTHR12677:SF24 - TRANSMEMBRANE PROTEIN 64 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTCCAGGCTGGCACTGGGTGGGCAGTGCGGCGAGGGGAAGTGTATGC
Internal bar code:TGCAACTTGTTAAGGAGCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:252
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAGCTCGTTCCCTAGGA
Suggested primer 2:ACATAGTCTCCGTCCGGTCA