Insertion junction: CLIP2.038209_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038209
Chromosome:chromosome 12
Location:3800601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514600 (1 of 1) 2.7.4.27 - ([Pyruvate, phosphate dikinase] phosphate) phosphotransferase / Pyruvate, phosphate dikinase regulatory protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCGCACACTTCTTCCTTGAGCGCCTAGCGTACACACACACGCACGCA
Internal bar code:CACTTAGCCGTATCCCTCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1847
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGAATAGGCTGCGAACAA
Suggested primer 2:AACTGGAATGCACTAGCCCC