Insertion junction: CLIP2.038209_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038209
Chromosome:chromosome 12
Location:3800602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514600 (1 of 1) 2.7.4.27 - ([Pyruvate, phosphate dikinase] phosphate) phosphotransferase / Pyruvate, phosphate dikinase regulatory protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGCTGCGGGGTATCGCACACGGTTGCGCACAAGAGTACGCCCAAGT
Internal bar code:CACTTAGCCGTATCCCTCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGGAATGCACTAGCCCC
Suggested primer 2:ACCGAATAGGCTGCGAACAA