Insertion junction: CLIP2.038211_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038211
Chromosome:chromosome 3
Location:4876465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178400 (1 of 1) IPR002893//IPR023407 - Zinc finger, MYND-type // Ribosomal protein S27e, zinc-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGGTACGCCACCAGCCAGGCATTCTTGCGGTACAGGTCGTTAGCGA
Internal bar code:ATGGTATCGTAGTTTTCAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3114
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGACTGGGTGGCGGTAG
Suggested primer 2:ACGGTGCCCTATTTCCTTGG