Insertion junction: CLIP2.038212_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038212
Chromosome:chromosome 6
Location:5375283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285300 SUT1 Sugar transporter; (1 of 1) K08200 - MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 3 (SLC22A3, OCT3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCGGCGTCGGCCCGATCGCCGCCGGCAGCAGCCAGCCCCGTCACCGG
Internal bar code:TGTGTTCAGGACCTATAGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1579
LEAP-Seq percent confirming:52.7778
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCATGGAGGGGAAAGGG
Suggested primer 2:CACACCAGGACCTGTCAGAC