Insertion junction: CLIP2.038216_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038216
Chromosome:chromosome 12
Location:4977075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524850 (1 of 1) IPR000104//IPR003593//IPR027417 - Antifreeze protein, type I // AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCAGGGGCGGCCTCGGACGCCTCAACTGCAGAGATGGTAGCCGGT
Internal bar code:GACATAAGTGACGATTATGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1529
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCCTGGCCGCATCATTG
Suggested primer 2:CGCCACAACGGTACAAACTG