Insertion junction: CLIP2.038227_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038227
Chromosome:chromosome 4
Location:3881960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230438 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACCCTCTCCCTCTCTCTCTCACACACACACACAAACAGACACAAACA
Internal bar code:TTAACGTCCTATGGTTTATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1785
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAACCCCCAAAATCCCCC
Suggested primer 2:CACACCCTAGCACTTCCCTG