Insertion junction: CLIP2.038227_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038227
Chromosome:chromosome 17
Location:6499268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGAGGCGCCGGCCGCCACCGCGCGCCCCTGCCATTTTGTCCTTATA
Internal bar code:GTAATAGTTGTTTGCCCAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1935
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTGGATCGTTTGCTGT
Suggested primer 2:GGTGGTTTGACGTTCGTGTG