Insertion junction: CLIP2.038231_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038231
Chromosome:chromosome 10
Location:1252141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426600 CYP739A6,CYP27 Cytochrome P450, CYP213 superfamily; (1 of 8) PTHR24286//PTHR24286:SF77 - FAMILY NOT NAMED // ABSCISIC ACID 8'-HYDROXYLASE 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAAGGTCTTCTCCTAGGCGACCCACACGCCGCGGCCCACGCCACACG
Internal bar code:TTTCAGATAGAGGGGCTGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:489
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:GCAAATTACCCGCTAAGCCG