Insertion junction: CLIP2.038235_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038235
Chromosome:chromosome 9
Location:2568290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392654 (1 of 3) PF14494 - Domain of unknown function (DUF4436) (DUF4436) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAGGCGATCATAGAATGTGGGCAGCGGGTGAACGTACTGGCATATCA
Internal bar code:AGTTGTACCACGTGGTCCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:466
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGATGATGATGGAGGTGA
Suggested primer 2:ATTGGGTGGTGATGCAGAGG