Insertion junction: CLIP2.038236_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038236
Chromosome:chromosome 9
Location:5509401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409000 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATGCAGCGTGGCGCGGCCATCGACCTGGCGGCGGTAGCGCGCGGCG
Internal bar code:GAGATCACAGCCCAACTTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3164
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACACACATGGCTCGGTG
Suggested primer 2:TGTCTACCTTTGGGAACGGC