Insertion junction: CLIP2.038248_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038248
Chromosome:chromosome 14
Location:3946348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632847 ELG44 Exostosin-like glycosyltransferase 44; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCTCCCCCTTTTGCCTCCCCCACCCTTGGGCTCGGGCATGATATCCC
Internal bar code:GCGTCCGCCCTACTCATACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:34.7826
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATGTCCTTGTGCTGGTC
Suggested primer 2:ATGGAGGCTGTTTGGGGATG