Insertion junction: CLIP2.038257_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038257
Chromosome:chromosome 16
Location:540351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692550 MSH4 DNA mismatch repair protein, MutS homolog; (1 of 1) K08740 - DNA mismatch repair protein MSH4 (MSH4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGGCAAAAGCTGAGAGGGAAAGCAGCCTGAACCAGTCACACACCCTC
Internal bar code:TGGAGGGATAGAGGGACAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCACCTCCTGTCCATA
Suggested primer 2:CTGCAAACAACAGCACACGA