Insertion junction: CLIP2.038266_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038266
Chromosome:chromosome 12
Location:415808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g495250 FAL15,FAP31 TPR-Repeat Flagellar Associated Protein 31; (1 of 14) PF13424 - Tetratricopeptide repeat (TPR_12) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGTGCACCAGCAGTCCTCACCTGTCCAGGCCGGGTGGCAGCAGCAGC
Internal bar code:ATTAGTCAGGAGGGGGCTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1608
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTATTCGGCTAGTGCA
Suggested primer 2:ACGGTGGCGTAAGAGTTCAG