Insertion junction: CLIP2.038269_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038269
Chromosome:chromosome 3
Location:4296659
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGTCCCGCTATGCGTCCCACACGCGCACGGTGCTGGTTCTTGTGGC
Internal bar code:TGCGGCTGGGTATTGTTAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGACGGAACTACTGCTCC
Suggested primer 2:GCAGAAACATTGGGAGCAGC