Insertion junction: CLIP2.038277_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038277
Chromosome:chromosome 1
Location:4004944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026300 (1 of 3) PF08238 - Sel1 repeat (Sel1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCCAAACTAAACGATAACCAACGAAAACGGGGGGGGGCGGGCAGCAG
Internal bar code:AAGGTTCTTGAGTTCTTGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3057
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAAAGCCATATCGCACG
Suggested primer 2:TCCTCATGTCGCCATGTGTC