Insertion junction: CLIP2.038277_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038277
Chromosome:chromosome 1
Location:4004951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026300 (1 of 3) PF08238 - Sel1 repeat (Sel1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGGTATTTACACACACCCCCCGGGCAGCGGCACTCTCACCGCATG
Internal bar code:ATAGATATTGAGCGATAAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4403
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCATGTCGCCATGTGTC
Suggested primer 2:CACCAAAGCCATATCGCACG