Insertion junction: CLIP2.038278_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038278
Chromosome:chromosome 11
Location:780080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467632 (1 of 1) IPR008979//IPR017853 - Galactose-binding domain-like // Glycoside hydrolase superfamily CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCGCCTCTGCACCCTCGCCTCCTCCCGCACCGCCGCCACCCCGCCC
Internal bar code:CTAATATAACAACGGAAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:470
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAAACCACCAGCACAGC
Suggested primer 2:CCGACTGGTCCAAGGTGTAC