Insertion junction: CLIP2.038283_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038283
Chromosome:chromosome 16
Location:7754600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g802014 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATCTCTTACCTGATGGGTCCGTATTTATGTGCCTTCTCGCCCTGCAG
Internal bar code:GCGGCTTCTGAGAGCGTAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2396
LEAP-Seq percent confirming:88.6364
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CATACTTTGGCGATGCACCG
Suggested primer 2:AACTCGGCTACTGCTGCAG