Insertion junction: CLIP2.038295_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038295
Chromosome:chromosome 12
Location:7714818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554929 CDS
Cre12.g555001 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGACCAGCCGCAGCCGCAGCCGCGGTCCGGAGCTGCGGCGGCACCGCG
Internal bar code:AAGGCACGTTGTCCTTGCATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGTCGATGTCCCGGAAT
Suggested primer 2:CAAAGGCTCCTCATGCTCGA