Insertion junction: CLIP2.038297_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038297
Chromosome:chromosome 2
Location:1095612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080550 PDE26 (1 of 1) PF00012//PF00233 - Hsp70 protein (HSP70) // 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I); 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGTGCCGCTGCCGCGGTGTAGTGTGCAGTCCACTCTGATCCGCACGG
Internal bar code:AGTTGGTATGCACTAATAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1169
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACACACACACACATGC
Suggested primer 2:CACGGTATCGGTGCTCTACC