Insertion junction: CLIP2.038304_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038304
Chromosome:chromosome 2
Location:5305419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113050 (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATATCAGATACGCGGTTACACACTTCCGAACTACGCCAACCTGCGCCT
Internal bar code:GTTGGTCCTTGTAAGTCGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5245
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGTTGCTCCGCAGAAGA
Suggested primer 2:CGGTTCCATGGCATGCAAAA