Insertion junction: CLIP2.038308_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038308
Chromosome:chromosome 16
Location:3894170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689050 ACX1,ACO1 Acyl-CoA oxidase/dehydrogenase; (1 of 1) PTHR10909//PTHR10909:SF250 - ELECTRON TRANSPORT OXIDOREDUCTASE // PEROXISOMAL ACYL-COENZYME A OXIDASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTTTGTGTGTGCCCTGCGCGCTGGCCGCCCCCTCCGCGCCCGGCCC
Internal bar code:TTTTGACGAAGAGTGTCTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGCCTCAGAGGAGCTAG
Suggested primer 2:GTTGGGGATTAAGGGGTGGG