Insertion junction: CLIP2.038309_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038309
Chromosome:chromosome 17
Location:512521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699250 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCACCGGGAACGCGAACGCCAGCCACATGACGATGGCCACGTGTCGTG
Internal bar code:GCGCTGGGTATGTGTGTTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3123
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGGGGCAAGTATATCCG
Suggested primer 2:CCGCATATGAGCAACTTGGC