Insertion junction: CLIP2.038314_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038314
Chromosome:chromosome 5
Location:501075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244200 TMA1,COTH2 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCCCGAAGCTGATGGGAGAGCCCACATTCTTGGACATGTACACACT
Internal bar code:AGTTCTACCCTCCGGGAACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGATTGGGATGCGGGT
Suggested primer 2:GACGGCAACTGCAACAACAT