Insertion junction: CLIP2.038317_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038317
Chromosome:chromosome 3
Location:8989920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800414 (1 of 1) PTHR12864//PTHR12864:SF13 - RAN BINDING PROTEIN 9-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGATTGGGCCGCACCCACCCGGCCAACCCGCCCCTCCCCCCCGGCA
Internal bar code:GACTATACTGACCGATATGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2977
LEAP-Seq percent confirming:65.1163
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCCCAGCTTGTGATTCT
Suggested primer 2:CACGGTGAAGTAGGCTGTGT