Insertion junction: CLIP2.038322_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038322
Chromosome:chromosome 3
Location:3463333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167050 PDX3 Pyridoxin biosynthesis protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAGGCTGCTGCTGTGTCCACGCGTGTCGCCGCAGGTGGGCGCAGCACG
Internal bar code:TATAAGGCATTTTGGAAACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2501
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCACCCCCAATCCTAAAT
Suggested primer 2:CGCAGGGCCCAATTTATGTG