Insertion junction: CLIP2.038331_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038331
Chromosome:chromosome 2
Location:829082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800173 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCCTGCAGACAGCTTCGTTACTAGGCTGCATTAAGCTACGGCGGCAG
Internal bar code:CTTTAATTGTACCAATGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:502
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGTAGGTAGTGGAGGA
Suggested primer 2:GCTGGACAGGCCTACTTGTT