Insertion junction: CLIP2.038331_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038331
Chromosome:chromosome 2
Location:837049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800173 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGAGCTTCGTCGGTGGCCAACGGCGACGACAACGCGCGAACGCACGCG
Internal bar code:CTTTAATTGTACCAATGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:590
LEAP-Seq percent confirming:24.2424
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGACAGGCCTACTTGTT
Suggested primer 2:GGGCAGTAGGTAGTGGAGGA