Insertion junction: CLIP2.038335_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038335
Chromosome:chromosome 8
Location:3854792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381702 ALDH5,ALDH5G1 (1 of 1) 1.2.1.16 - Succinate-semialdehyde dehydrogenase (NAD(P)(+)); Aldehyde dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAAACACTGTCTTTGCGCAATGTTTTCCTTGTGCTCTTTAACACACAC
Internal bar code:ACGTTCAAACCTCCGATTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAATGTGTGAGGGGGTG
Suggested primer 2:ACAAAGCTATGCGCCCTCTT