Insertion junction: CLIP2.038360_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038360
Chromosome:chromosome 17
Location:516852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699300 (1 of 60) 5.2.1.8 - Peptidylprolyl isomerase / Rotamase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCCGCCACGTGCTGCACCATTTGCGCGTACTCGGCTGTGTGAGGGGA
Internal bar code:TACCAGGCCTGTTGACCCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3148
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGTCTACGTAGCGCTG
Suggested primer 2:GAGCAACTCAAAATGGCCGG