Insertion junction: CLIP2.038363_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038363
Chromosome:chromosome 16
Location:1201947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650650 AGT3 Alanine-glyoxylate aminotransferase; (1 of 1) 4.2.3.2 - Ethanolamine-phosphate phospho-lyase / O-phosphorylethanol-amine phospho-lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGCGCGAGGCATCAATGTGTCCCCCCAACTACAGCTCGCTCCGGAA
Internal bar code:TAGTGTAGGATTTGGGGCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCTAGTCCCACTGCCCT
Suggested primer 2:TGAGGAGTAGGTGGGTAGCC