Insertion junction: CLIP2.038368_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038368
Chromosome:chromosome 5
Location:1408229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234640 (1 of 1) IPR000048//IPR011989//IPR016024 - IQ motif, EF-hand binding site // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTTGAGTTTGGACTGGTCATTACAACCCGCCCCCTGCCGCACGCCCC
Internal bar code:AACGGTTTATCTGTACCATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTCCAGCACATGCACAA
Suggested primer 2:GATGACGATGACGACGAGCT