Insertion junction: CLIP2.038375_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038375
Chromosome:chromosome 17
Location:6835812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g747247 FAP2 TPR-domain Flagellar Associated Protein 2; (1 of 1) IPR002151//IPR003593//IPR013026//IPR019734//IPR027417 - Kinesin light chain // AAA+ ATPase domain // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGTGTGTGTATGTATATGTTTGTGTGTGTGTGTGTGTATGTGTGTG
Internal bar code:GTGGTTGGTGACTTGGTATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:146
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGCATCGCATACACTG
Suggested primer 2:GTACACGTGGGGGTTACAGG