Insertion junction: CLIP2.038388_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038388
Chromosome:chromosome 7
Location:918779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318950 (1 of 1) IPR000008//IPR000104//IPR003072 - C2 domain // Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCATGAACGGGGTGACGGGCTCGGGCACGCACGCGCGCCTGCTGCGT
Internal bar code:GATAAGCCATAACATCTATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:8.21918
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGAATCCCGAATGCGC
Suggested primer 2:ACACCGGTGAGTTTGCGTAT