Insertion junction: CLIP2.038405_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038405
Chromosome:chromosome 10
Location:4682031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCAAGCAGCAGTGGTGATGCGTGTACTTTGCACGTGCGGCGTGCG
Internal bar code:GGGTTAGCGCAGGTGATGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1257
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAACCGTGTGAGCTCAGA
Suggested primer 2:CAATGTGCATAGCTGACGGC