Insertion junction: CLIP2.038405_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038405
Chromosome:chromosome 10
Location:4682037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTGCTCCCCTGGCAGAGTCAATGCAACGACACATACGCAGTATTGGC
Internal bar code:GGGTTAGCGCAGGTGATGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1251
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGTGCATAGCTGACGGC
Suggested primer 2:GTCAACCGTGTGAGCTCAGA