Insertion junction: CLIP2.038405_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038405
Chromosome:chromosome 11
Location:3400664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477100 FAP97 (1 of 1) IPR003882//IPR029488 - Pistil-specific extensin-like protein // KIAA1430 homologue; Flagellar Associated Protein 97 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGAGCGTTGCGAGCTCGGTTGGCTTTACCTTAGACACATCAATGTG
Internal bar code:ATATCTTCGTCTTCCCATCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1161
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GATAAAGCCTGCTCAACGCG
Suggested primer 2:CGTGGGCTCAAAATCCTCCT