Insertion junction: CLIP2.038406_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038406
Chromosome:chromosome 6
Location:5281801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284450 PPP24 (1 of 2) K15731 - carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] (CTDSP); Phosphoprotein phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCTCCCACGACCCTCAAAATGACGAGAACATACTAGCGAAGCCTCTG
Internal bar code:AACTTGGCACGGCTTTACGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3875
LEAP-Seq percent confirming:98.8095
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGGAGGAGATGGAGCG
Suggested primer 2:CAGTTTATTCGCCGCAGCTC