Insertion junction: CLIP2.038408_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038408
Chromosome:chromosome 9
Location:2126030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCTTCCCTTATGCGCTTGAAGGCAGGGTCCAGCACCCCAGATGGGT
Internal bar code:TAGCTGGGAAAAAAGACTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3041
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTACTACTTGCGGTGGCC
Suggested primer 2:CTAGCCCAGTAACCCCCTCT