Insertion junction: CLIP2.038414_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.038414
Chromosome:chromosome 3
Location:5820271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800348 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCCGCGCCCGTGCTTTTGGGCGGCCCGCCGGAGGAAGATTGCTGGGT
Internal bar code:TATAGTATTCACCCTCTTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTTTGTGGAGACGGCT
Suggested primer 2:CACAACCCATCCACCTCCTC