Insertion junction: CLIP2.038415_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038415
Chromosome:chromosome 5
Location:457198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243950 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGGTGTGACCAGCAAGGCTGCAAGGCGGCCGCGACCGTTGCACTTG
Internal bar code:GTCACTGGTTATGCGCCTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:58.5714
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCACGCTGCTCTGAATAA
Suggested primer 2:CAAACAGCTGCACCAGGTTC