Insertion junction: CLIP2.038415_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038415
Chromosome:chromosome 5
Location:457203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243950 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACAAACCCGTTGCGGGCAGGTATGTGATGCAGCTGGATGACGATTCCT
Internal bar code:GTCACTGGTTATGCGCCTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1179
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAGCTGCACCAGGTTC
Suggested primer 2:TGCCACGCTGCTCTGAATAA